I’m learning how to make a script for SPM.
Below is a simple script which converts the data type of the image file.
It should work for both SPM8 and SPM5.
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%Data type converter%Convert the data type (uint8, int16, int32, float32, float64)%Usage%Change the value at line 26(options.dtype) to the datatype you want.%Kiyotaka Nemoto 2 Jan 2010P = spm_select(Inf,’image’,'Select Files to be converted’);for i=1:size(P,1)ref = deblank(P(i,:));[pth,nam,ext] = spm_fileparts(ref);odir = pth;cvt = ['d' nam '.nii'];matlabbatch{1}.spm.util.imcalc.input = {ref};matlabbatch{1}.spm.util.imcalc.output = cvt;matlabbatch{1}.spm.util.imcalc.outdir = {odir};matlabbatch{1}.spm.util.imcalc.expression = ‘i1′;matlabbatch{1}.spm.util.imcalc.options.dmtx = 0;matlabbatch{1}.spm.util.imcalc.options.mask = 0;matlabbatch{1}.spm.util.imcalc.options.interp = 1;matlabbatch{1}.spm.util.imcalc.options.dtype = 4;% uint8=2; int16=4; int32=8; float32=16; float64=64spm_jobman(‘run’,matlabbatch);end%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
Download datatypeconv.m
